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Thwomp Thump is the eighth captain command in the Minion Quest: The Search for Bowser mode of Mario & Luigi: Superstar Saga + Bowser's Minions. It costs six CP to use. When used, the captain will summon a Thwomp to create shockwaves on the ground. The opposing team can dodge the shockwaves at just the right moment with . The attack ends after several shockwaves have passed. Ludwig von Koopa is the only enemy captain that can use it.
This Captain Command returns in the Bowser Jr.'s Journey mode of Mario & Luigi: Bowser's Inside Story + Bowser Jr.'s Journey as the second Captain Command used by Morton Koopa Jr., the first one being Shield. It works the same way, except Morton stomps on a random enemy after the Thwomp hits the ground.